WormBase Tree Display for Gene: WBGene00113697
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WBGene00113697 | SMap | S_parent | Sequence | PPA_ChrI | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 8 | |||||||
Name | CGC_name | Ppa-atn-1 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA24143 | ||||||||
Molecular_name | PPA24143 | ||||||||
PPA24143.1 | |||||||||
PP46321 | |||||||||
Other_name | GENEPREDICTION_SNAP300000080894 | ||||||||
UMS-S469-1.5 | Person_evidence | WBPerson606 | |||||||
Public_name | Ppa-atn-1 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-atn-1 | ||||
3 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
4 | 08 May 2019 10:09:24 | WBPerson1983 | Name_change | CGC_name | Ppa-atn-1 | ||||
5 | 04 Feb 2020 15:43:57 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
6 | 04 Jun 2020 14:38:21 | WBPerson1983 | Name_change | CGC_name | Ppa-atn-1 | ||||
7 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
8 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-atn-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | atn | ||||||||
RNASeq_FPKM (2) | |||||||||
Ortholog (23) | |||||||||
Paralog | WBGene00089718 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
WBGene00096016 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00097822 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00100220 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00104091 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00111046 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00112003 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00114764 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: CH domain superfamily; Calponin homology domain; and Calponin homology (CH) domain. Is an ortholog of C. elegans atn-1. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA24143 | |||||||
Corresponding_transcript | PPA24143.1 | ||||||||
Other_sequence (17) | |||||||||
Experimental_info | Microarray_results | GPL14372_Probes_17092 | |||||||
GPL14372_Probes_17093 | |||||||||
GPL14372_Probes_17094 | |||||||||
GPL14372_Probes_17095 | |||||||||
GPL14372_Probes_17096 | |||||||||
Expression_cluster | WBPaper00041472:Phosphorylated_protein | ||||||||
WBPaper00050265:C.albidus_vs_OP50_upregulated | |||||||||
Remark | [190208 pad] The CGC name Ppa-atn-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
[200204 pad] The CGC name Ppa-atn-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
[210528 pad] The CGC name Ppa-atn-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |