WormBase Tree Display for Gene: WBGene00114883
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| WBGene00114883 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | Sequence_name | PPA25329 | |||||||
| Molecular_name | PPA25329 | ||||||||
| PPA25329.1 | |||||||||
| PP63416 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000082177 | ||||||||
| GENEPREDICTION_SNAP300000082178 | |||||||||
| UMM-S387-6.81 | Person_evidence | WBPerson606 | |||||||
| Public_name | PPA25329 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:51 | WBPerson4055 | Event | Acquires_merge | WBGene00114884 | ||||
| 3 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-vab-1 | ||||
| 4 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 5 | 08 May 2019 10:09:25 | WBPerson1983 | Name_change | CGC_name | Ppa-vab-1 | ||||
| 6 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| Acquires_merge | WBGene00114884 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 1.05188 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0.350627 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00184765 | ||||||||
| 00184766 | |||||||||
| 00184767 | |||||||||
| 00184768 | |||||||||
| 00184769 | |||||||||
| 00184770 | |||||||||
| 00184771 | |||||||||
| Ortholog (35) | |||||||||
| Paralog (31) | |||||||||
| Structured_description | Automated_description | Predicted to enable ATP binding activity and ephrin receptor activity. Predicted to be involved in transmembrane receptor protein tyrosine kinase signaling pathway. Predicted to be located in plasma membrane. Is an ortholog of C. elegans F59F5.3 and vab-1. In C. elegans, vab-1 is involved in several processes, including cell development; embryonic morphogenesis; and regulation of axon guidance. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA25329 | |||||||
| Corresponding_transcript | PPA25329.1 | ||||||||
| Other_sequence (24) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_28477 | |||||||
| GPL14372_Probes_83780 | |||||||||
| GPL14372_Probes_83781 | |||||||||
| Remark | [190208 pad] The CGC name Ppa-vab-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-vab-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
