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WormBase Tree Display for Gene: WBGene00115137

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Name Class

WBGene00115137SMapS_parentSequencePPA_ChrX
IdentityVersion2
NameCGC_namePpa-daf-9.2From_analysisInferred_from_orthology
Sequence_namePPA25583
Molecular_namePPA25583
PPA25583.1
PP73232
Other_nameGENEPREDICTION_SNAP300000082439
UMM-S293-10.10Person_evidenceWBPerson606
Public_namePpa-daf-9.2
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_namePpa-daf-9.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdaf
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001011.64708From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
4.94124From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00184917
00184918
00184919
00184920
OrthologWBGene00000905Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00031828Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00035243Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00051553Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00163344Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00125482Caenorhabditis japonicaFrom_analysisOMA
Inparanoid_8
WBGene00222818Brugia malayiFrom_analysisWormBase-Compara
WBGene00247608Onchocerca volvulusFrom_analysisWormBase-Compara
Paralog (28)
Structured_descriptionAutomated_descriptionPredicted to enable heme binding activity; iron ion binding activity; and oxidoreductase activity. Is an ortholog of C. elegans daf-9. In C. elegans, daf-9 is involved in cell-cell signaling; dauer larval development; and regulation of cell migration.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA25583
Corresponding_transcriptPPA25583.1
Other_sequenceOden_isotig20302
Oden_isotig19452
PPC06861_1
Dviv_isotig27900
Experimental_infoMicroarray_resultsGPL14372_Probes_64977
GPL14372_Probes_64978
GPL14372_Probes_64979
GPL14372_Probes_64980
GPL14372_Probes_64981
GPL14372_Probes_64982
MethodGene