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WormBase Tree Display for Gene: WBGene00115296

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Name Class

WBGene00115296SMapS_parentSequencePPA_ChrX
IdentityVersion1
NameCGC_namePpa-calu-1From_analysisInferred_from_orthology
Sequence_namePPA25742
Molecular_namePPA25742
PPA25742.1
PP18180
Other_nameGENEPREDICTION_SNAP300000082594
UMM-S398-2.30Person_evidenceWBPerson606
Public_namePpa-calu-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcalu
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
20.7906From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
6.9302From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00184957
Ortholog (31)
ParalogWBGene00101442Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00283751Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Is an ortholog of C. elegans calu-1. In C. elegans, calu-1 is involved in cuticle development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA25742
Corresponding_transcriptPPA25742.1
Other_sequence (135)
Experimental_infoMicroarray_resultsGPL14372_Probes_74534
GPL14372_Probes_74535
GPL14372_Probes_74536
Expression_clusterWBPaper00061743:ppa-eud-1(tu1069)_regulated
WBPaper00041207:PP_dauer_down
WBPaper00041606:PP_X.nematophila_regulated
MethodGene