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WormBase Tree Display for Gene: WBGene00117727

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Name Class

WBGene00117727SMapS_parentSequencePPA_ChrII
IdentityVersion9
NameCGC_namePpa-unc-104.1From_analysisInferred_from_orthology
Sequence_namePPA28173
Molecular_namePPA28173
PPA28173.1
PP74992
Other_nameGENEPREDICTION_SNAP300000086590
UMM-S10-74.32Person_evidenceWBPerson606
Public_namePpa-unc-104.1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:07WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:52WBPerson4055EventAcquires_mergeWBGene00204963
320 Mar 2018 10:26:11WBPerson4025Name_changeCGC_namePpa-unc-104
408 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
508 May 2019 10:09:25WBPerson1983Name_changeCGC_namePpa-unc-104
601 Oct 2019 10:47:49WBPerson1983Name_changeCGC_namePpa-unc-104.1
Other_namePpa-unc-104
704 Feb 2020 15:43:56WBPerson1983Name_changeCGC_namePpa-unc-104
Other_namePpa-unc-104.1
828 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
928 Jul 2021 11:12:29WBPerson1983Name_changeCGC_namePpa-unc-104.1
Acquires_mergeWBGene00204963
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00185937
00185938
00185939
00185940
OrthologWBGene00032363Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00054230Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
WBGene00137339Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00192754Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00223161Brugia malayiFrom_analysisWormBase-Compara
WBGene00006831Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00207185Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00208428Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00216088Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00246819Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g7459Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g11865Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g12288Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g4426Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g1282Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17398Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g11354Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g10022Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g174Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g12720Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g1379Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g22283Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g23655Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g2367Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g26068Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g27512Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8423Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00458.g11091Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00619.g12846Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-104Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g12131Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00267.g8321Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_16956Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_16961Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_006395Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02329Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g13441Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g13443Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20265400Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g4910Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00266694Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00287770Trichuris murisFrom_analysisWormBase-Compara
Paralog (17)
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity; microtubule binding activity; and microtubule motor activity. Predicted to be involved in microtubule-based movement. Is an ortholog of C. elegans unc-104. In C. elegans, unc-104 is involved in several processes, including chemical synaptic transmission; regulation of cellular component organization; and regulation of cellular localization.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA28173
Corresponding_CDS_historyPPA28173:pp272
Corresponding_transcriptPPA28173.1
Other_sequence (16)
Experimental_infoMicroarray_resultsGPL14372_Probes_12501
GPL14372_Probes_12502
GPL14372_Probes_12503
GPL14372_Probes_12504
GPL14372_Probes_12505
Remark[190208 pad] The CGC name Ppa-unc-104 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-unc-104 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
Removed duplicate Other_name Ppa-unc-104.1Curator_confirmedWBPerson1983
MethodGene