WormBase Tree Display for Gene: WBGene00121020

WBGene00121020 SMap: S_parent: Sequence: Cjap.Contig17603
  Identity: Version: 2
    Name: CGC_name: Cjp-pqm-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA01816
      Molecular_name: CJA01816
        CJA01816.1
        JA00248
      Public_name: Cjp-pqm-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:20 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-pqm-1
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pqm
    RNASeq_FPKM: WBls:0000004 16.4419 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 28.2294 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 11.3314 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        13.0825 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        14.8336 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 12.0855 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        13.5121 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        16.2693 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        17.1168 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        17.599 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        18.0812 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        18.7373 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        22.8091 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        23.4767 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        26.5479 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
      WBls:0000101 16.4419 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        16.9796 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    Ortholog (25)
    Paralog: WBGene00137892 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Zinc finger C2H2 superfamily and Zinc finger C2H2-type. Is an ortholog of C. elegans pqm-1. In C. elegans, pqm-1 is involved in several processes, including defense response to other organism; positive regulation of macromolecule biosynthetic process; and regulation of vitellogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA01816
    Corresponding_transcript: CJA01816.1
    Other_sequence (13)
  Experimental_info: Expr_pattern: Expr1087501
    Microarray_results: GPL14145_CJA01816_471-530_0.938_1_C
      GPL14145_CJA01816_728-787_0.731_76_B
      GPL14145_CJA01816_814-873_0.783_57_A
  Method: Gene