WormBase Tree Display for Gene: WBGene00122418

WBGene00122418 SMap: S_parent: Sequence: Cjap.Contig18051
  Identity: Version: 6
    Name: CGC_name: Cjp-nhr-48 From_analysis: Inferred_from_orthology
      Sequence_name: CJA03214
      Molecular_name: CJA03214
        CJA03214.1
        JA65028
      Public_name: Cjp-nhr-48
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:20 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-nhr-48
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
        3 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:23 WBPerson1983 Name_change: CGC_name: Cjp-nhr-48
        5 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Cjp-nhr-48
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    RNASeq_FPKM: WBls:0000004 23.5915 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 17.1424 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 10.5168 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        10.6731 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        10.8294 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 12.3786 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        12.4014 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        13.308 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        2.66326 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        2.9818 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        3.16377 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        4.21746 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        6.70586 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        7.53857 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        9.19426 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
      WBls:0000101 10.5168 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        9.41451 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00189193
      00189194
      00189195
      00189196
    Ortholog (30)
    Paralog (105)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-48. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA03214
    Corresponding_transcript: CJA03214.1
    Other_sequence: AS13263
      CBC16456_1
      JI166537.1
      DN558166.1
      CRC04316_1
      JI221228.1
      LSC01052_1
      CR00423
  Experimental_info: Expr_pattern: Expr1084126
    Microarray_results: GPL14145_CJA03214_1919-1978_0.882_40_C
      GPL14145_CJA03214_1999-2058_0.936_3_A
      GPL14145_CJA03214_2093-2152_0.951_1_B
  Remark: [190208 pad] The CGC name Cjp-nhr-48 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Cjp-nhr-48 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene