WormBase Tree Display for Gene: WBGene00122648

WBGene00122648 SMap: S_parent: Sequence: Cjap.Contig7764
  Identity: Version: 6
    Name: CGC_name: Cjp-lin-22 From_analysis: Inferred_from_orthology
      Sequence_name: CJA03444
      Molecular_name: CJA03444a
        CJA03444a.1
        JA49175
        CJA03444b
        JA45701
        CJA03444b.1
      Public_name: Cjp-lin-22
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:20 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-lin-22
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
        3 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:25 WBPerson1983 Name_change: CGC_name: Cjp-lin-22
        5 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Cjp-lin-22
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lin
    RNASeq_FPKM: WBls:0000004 2.71488 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 1.6192 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 1.32338 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        2.28674 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        3.25009 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.049715 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        0.141112 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        0.152589 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        0.159865 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        0.174049 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        0.188233 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        0.20053 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        0.238755 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        0.242505 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        0 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
      WBls:0000101 0.20053 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        0.779097 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00189370
    Ortholog: WBGene00026235 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00220960 Brugia malayi From_analysis: WormBase-Compara
      WBGene00003008 Caenorhabditis elegans From_analysis: WormBase-Compara
      CSP26.g20760 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g2635 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP38.g6746 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g2347 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g24520 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g17172 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_01775.g16729 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-lin-22 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold604.g5529 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00058.g2863 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_04786 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014326 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_40245500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00065705 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00076897 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrIV_pilon.g9902 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00241807 Onchocerca volvulus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable protein dimerization activity. Is an ortholog of C. elegans lin-22. In C. elegans, lin-22 is involved in anterior/posterior pattern specification; negative regulation of gene expression; and nematode male tail tip morphogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA03444a
      CJA03444b
    Corresponding_transcript: CJA03444a.1
      CJA03444b.1
    Other_sequence: EX916391.1
      FG580067.1
      FG582685.1
      HBC05050_1
  Experimental_info: Expr_pattern: Expr1078034
    Microarray_results: GPL14145_CJA03444_1-60_0.621_55_C
      GPL14145_CJA03444_160-219_0.911_3_B
      GPL14145_CJA03444_357-416_0.852_10_A
  Remark: [190208 pad] The CGC name Cjp-lin-22 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Cjp-lin-22 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene