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WormBase Tree Display for Gene: WBGene00122770

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Name Class

WBGene00122770SMapS_parentSequenceCjap.Contig8708
IdentityVersion3
NameCGC_nameCjp-ymel-1.1From_analysisInferred_from_orthology
Sequence_nameCJA03566
Molecular_nameCJA03566
CJA03566.1
JA43710
Public_nameCjp-ymel-1.1
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:20WBPerson4055EventImportedNGASP import
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
328 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameCjp-ymel-1.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classymel
RNASeq_FPKMWBls:000000410.1679From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002731.0136From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003813.0088From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
17.4981From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
8.51941From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:000004122.402From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
55.6784From_analysisRNASeq.japonica.WBls:0000041.control_mean
59.8589From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
61.4176From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
65.0867From_analysisRNASeq.japonica.WBls:0000041.control_median
68.7559From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
70.3618From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
72.3947From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
81.8905From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
8.34583From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
WBls:000010131.0136From_analysisRNASeq.japonica.total_over_all_stages.control_median
39.4328From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00189468
00189469
00189470
00189471
Ortholog (32)
ParalogWBGene00215419Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00120711Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00121717Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00138111Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00177517Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00183410Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00206996Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity; ATP-dependent peptidase activity; and metalloendopeptidase activity. Predicted to be involved in proteolysis. Is an ortholog of C. elegans ymel-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA03566
Corresponding_transcriptCJA03566.1
Other_sequenceFC546981.1
Dviv_isotig14574
FC542364.1
FC540404.1
FC539458.1
FC551582.1
FC542665.1
MethodGene