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WormBase Tree Display for Gene: WBGene00124340

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Name Class

WBGene00124340SMapS_parentSequenceCjap.Contig17303
Identity (5)
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000000427.7558From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002717.6186From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003825.0936From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
25.2864From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
25.4793From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000411.17753From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
1.64118From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
1.8028From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
2.49389From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
2.77293From_analysisRNASeq.japonica.WBls:0000041.control_median
3.05197From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
3.17816From_analysisRNASeq.japonica.WBls:0000041.control_mean
3.81497From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
4.93843From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
6.50449From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
WBls:00001013.81497From_analysisRNASeq.japonica.total_over_all_stages.control_median
9.33635From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00190754
00190755
00190756
00190757
00190758
00190759
00190760
00190761
00190762
00190763
OrthologWBGene00006801Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00038324Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00052257Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00163093Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00193580Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00193883Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193891Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00225260Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g2262Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g4665Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g3330Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8818Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g5594Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g19710Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g10857Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g1182Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g12556Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g19315Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g4569Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g21529Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00439.g10869Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_01390.g16355Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_02379.g17124Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_02506.g17262Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_04140.g18630Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_05389.g19560Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_06964.g20594Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_10065.g22436Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_13819.g24396Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_16100.g25259Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_18335.g25942Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-68Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g19947Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold556.g3752Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold556.g3753Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00905.g16628Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_15641Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_018015Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10076Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g4808Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g4810Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50223100Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g14545Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00245273Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00276305Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00256983Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00296466Trichuris murisFrom_analysisWormBase-Compara
WBGene00296467Trichuris murisFrom_analysisWormBase-Compara
WBGene00301423Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00130571Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00209587Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00216080Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00217302Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00218877Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity and ryanodine-sensitive calcium-release channel activity. Predicted to be involved in calcium ion transmembrane transport and intracellular calcium ion homeostasis. Predicted to be located in membrane. Is an ortholog of C. elegans unc-68. In C. elegans, unc-68 is involved in locomotion; positive regulation of programmed cell death; and protein localization to organelle.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA05136
Corresponding_transcriptCJA05136.1
Other_sequence (99)
Experimental_infoExpr_patternExpr1070979
Microarray_resultsGPL14145_CJA05136_15100-15159_0.918_4_B
GPL14145_CJA05136_15155-15214_0.948_1_C
GPL14145_CJA05136_15264-15323_0.824_55_A
MethodGene