WormBase Tree Display for Gene: WBGene00125201

WBGene00125201 SMap: S_parent: Sequence: Cjap.Contig4829
  Identity: Version: 4
    Name: CGC_name: Cjp-lgc-53 From_analysis: Inferred_from_orthology
      Sequence_name: CJA05997
      Molecular_name: CJA05997a
        CJA05997a.1
        JA29993
        CJA05997b
        JA49295
        CJA05997b.1
      Public_name: Cjp-lgc-53
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-lgc-53
        2 27 Jan 2009 15:19:29 WBPerson4055 Name_change: CGC_name: Removed
        3 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
        4 20 Mar 2018 10:26:10 WBPerson4025 Name_change: CGC_name: Cjp-lgc-53
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lgc
    RNASeq_FPKM: WBls:0000004 1.51534 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 2.8096 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 0.759503 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        1.68537 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        2.61123 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.272677 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        0.48182 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        0.531934 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        0.685194 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        0.873967 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        0.894041 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        1.06274 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        1.30217 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        1.34828 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        1.46751 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
      WBls:0000101 1.06274 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        1.14215 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00191455
      00191456
      00191457
      00191458
      00191459
      00191460
    Ortholog (27)
    Paralog (118)
    Structured_description: Automated_description: Predicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans lgc-53. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA05997a
      CJA05997b
    Corresponding_transcript: CJA05997a.1
      CJA05997b.1
    Other_sequence (12)
  Experimental_info: Expr_pattern: Expr1086499
    Microarray_results: GPL14145_CJA05997_428-487_0.901_10_C
      GPL14145_CJA05997_612-671_0.955_2_B
      GPL14145_CJA05997_829-888_0.921_7_A
  Method: Gene