WormBase Tree Display for Gene: WBGene00125992

WBGene00125992 SMap: S_parent: Sequence: Cjap.Contig17503
  Identity: Version: 2
    Name: CGC_name: Cjp-pax-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA06788
      Molecular_name: CJA06788
        CJA06788.1
        JA07698
      Public_name: Cjp-pax-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-pax-1
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pax
    RNASeq_FPKM: WBls:0000004 6.83724 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 0.324615 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 0 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
            RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.176917 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        0.327985 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        0.359049 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        0.465482 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        0.495265 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        0.525048 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        0.527034 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        0.712725 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        0.806267 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        0.842799 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
      WBls:0000101 0.359049 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        0.875241 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00192084
      00192085
    Ortholog (31)
    Paralog (18)
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans pax-1. In C. elegans, pax-1 is involved in defense response to Gram-negative bacterium. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA06788
    Corresponding_transcript: CJA06788.1
    Other_sequence: FE912383.1
      AS09891
      JI178027.1
      AS09940
      JI484182.1
      Dviv_isotig19005
      ASC07026_1
      TX00931
      JO473882.1
      Dviv_isotig19006
  Experimental_info: Expr_pattern: Expr1087338
    Microarray_results: GPL14145_CJA06788_227-286_0.703_83_C
      GPL14145_CJA06788_441-500_0.923_3_B
      GPL14145_CJA06788_506-565_0.903_12_A
  Method: Gene