WormBase Tree Display for Gene: WBGene00130841

WBGene00130841 SMap: S_parent: Sequence: Cjap.Contig17874
  Identity: Version: 2
    Name: CGC_name: Cjp-lgc-54 From_analysis: Inferred_from_orthology
      Sequence_name: CJA11637
      Molecular_name: CJA11637
        CJA11637.1
        JA49244
      Public_name: Cjp-lgc-54
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:22 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-lgc-54
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lgc
    RNASeq_FPKM: WBls:0000004 0 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 0.113846 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 0 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
            RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.054227 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        0.13727 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        0.141629 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        0.145988 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        0.163728 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        0.285321 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        0.319476 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        0.367545 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        0 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
            RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
      WBls:0000101 0.054227 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        0.109513 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00195909
      00195910
      00195911
      00195912
      00195913
      00195914
    Ortholog (28)
    Paralog (118)
    Structured_description: Automated_description: Predicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans lgc-54. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA11637
    Corresponding_transcript: CJA11637.1
    Other_sequence: JI173495.1
      JI169197.1
      Tcir_isotig25611
      CBC07593_1
  Experimental_info: Expr_pattern: Expr1077506
    Microarray_results: GPL14145_CJA11637_1019-1078_0.890_29_A
      GPL14145_CJA11637_1261-1320_0.949_4_C
      GPL14145_CJA11637_1418-1477_0.973_1_B
  Method: Gene