WormBase Tree Display for Gene: WBGene00132704

WBGene00132704 SMap: S_parent: Sequence: Cjap.Contig14111
  Identity: Version: 2
    Name: CGC_name: Cjp-smk-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA13500
      Molecular_name: CJA13500
        CJA13500.1
        JA68083
      Public_name: Cjp-smk-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:22 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-smk-1
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: smk
    RNASeq_FPKM: WBls:0000004 127.592 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 97.2562 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 37.3355 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        38.6317 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        39.9279 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 21.3976 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        24.7917 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        27.3597 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        34.2906 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        48.6791 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        51.3116 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        68.3326 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        69.6255 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        69.7471 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        73.8877 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
      WBls:0000101 39.9279 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        53.1957 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    Ortholog (36)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: PH-like domain superfamily; Phosphatase 4 regulatory subunit 3; Domain of unknown function DUF625; and Armadillo-type fold. Is an ortholog of C. elegans smk-1. In C. elegans, smk-1 is involved in several processes, including defense response to bacterium; negative regulation of mitotic DNA damage checkpoint; and response to radiation. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA13500
    Corresponding_CDS_history: CJA13500:jp232
    Corresponding_transcript: CJA13500.1
    Other_sequence (47)
  Experimental_info: Expr_pattern: Expr1074532
    Microarray_results: GPL14145_CJA13500_2661-2720_0.852_62_B
      GPL14145_CJA13500_2766-2825_0.884_22_A
      GPL14145_CJA13500_3332-3391_0.751_206_C
  Method: Gene