WormBase Tree Display for Gene: WBGene00135142

WBGene00135142 SMap: S_parent: Sequence: Cjap.Contig17796
  Identity: Version: 5
    Name: Sequence_name: CJA15938
      Molecular_name: CJA15938a
        CJA15938a.1
        JA48949
        CJA15938b
        JA48125
        CJA15938b.1
      Public_name: CJA15938
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-nca-1
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
        3 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Removed
        4 01 Oct 2019 10:47:49 WBPerson1983 Name_change: CGC_name: Cjp-unc-77.2
        5 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000004 1.37016 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 2.23039 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 1.95944 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        2.55046 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        3.14147 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.025554 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        0.054605 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        0.074667 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        0.110756 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        0.124599 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        0.138442 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        0.216093 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        0.262646 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        0.516457 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        0.545614 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
      WBls:0000101 0.262646 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        0.802323 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00199361
      00199362
      00199363
      00199364
      00199365
    Ortholog (39)
    Paralog (11)
    Structured_description: Automated_description: Predicted to enable monoatomic cation channel activity. Predicted to be involved in monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans unc-77. In C. elegans, unc-77 is involved in positive regulation of GABAergic synaptic transmission; positive regulation of cholinergic synaptic transmission; and positive regulation of locomotion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA15938a
      CJA15938b
    Corresponding_transcript: CJA15938a.1
      CJA15938b.1
    Other_sequence (16)
  Experimental_info: Expr_pattern: Expr1071107
      Expr1079923
    Microarray_results: GPL14145_CJA15938_1575-1634_0.948_1_A
      GPL14145_CJA15938_1578-1637_0.933_2_B
      GPL14145_CJA15938_1684-1743_0.933_3_C
      GPL14145_CJA21832_337-396_0.917_1_A
  Remark: [180319 gw3] The CGC name Cjp-nca-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson4025
    [210528 pad] The CGC name Cjp-unc-77.2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene