WormBase Tree Display for Gene: WBGene00138889

WBGene00138889 SMap: S_parent: Sequence: Cbre_Contig11
  Identity: Version: 2
    Name: CGC_name: Cbn-smd-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN00164
      Molecular_name: CBN00164
        CBN00164.1
        CN28157
      Public_name: Cbn-smd-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:50 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-smd-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: smd
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 18.635 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        37.27 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 16.5726 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        50.3017 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        58.1679 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        6.92318 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        7.38662 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 79.7247 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        81.4162 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        83.1077 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 23.3776 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        33.1123 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00202241
      00202242
      00202243
    Ortholog (33)
    Structured_description: Automated_description: Predicted to enable adenosylmethionine decarboxylase activity. Predicted to be involved in spermidine biosynthetic process and spermine biosynthetic process. Is an ortholog of C. elegans smd-1. In C. elegans, smd-1 is involved in spermidine biosynthetic process and spermine biosynthetic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN00164
    Corresponding_CDS_history: CBN00164:np197
    Corresponding_transcript: CBN00164.1
    Other_sequence (111)
  Experimental_info: Microarray_results: GPL14142_CBN00164_516-575_0.796_46_B
      GPL14142_CBN00164_748-807_0.935_2_C
      GPL14142_CBN00164_892-951_0.937_1_A
  Method: Gene