WormBase Tree Display for Gene: WBGene00140245

WBGene00140245 SMap: S_parent: Sequence: Cbre_Contig35
  Identity: Version: 2
    Name: CGC_name: Cbn-xpd-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN01520
      Molecular_name: CBN01520
        CBN01520.1
        CN27929
      Public_name: Cbn-xpd-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:50 WBPerson4055 Event: Imported: from NGASP
        2 21 Jul 2014 15:54:07 WBPerson2970 Name_change: CGC_name: Cbn-xpd-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: xpd
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        23.7987 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        47.5974 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        20.3284 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        20.5153 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        20.5466 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        23.3648 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        25.7721 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
      WBls:0000038 19.4258 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        19.5828 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        19.7399 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 17.0473 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        17.6223 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00203345
      00203346
      00203347
      00203348
      00203349
      00203350
      00203351
      00203352
      00203353
    Ortholog (33)
    Paralog: WBGene00142791 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00143172 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00157326 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00164179 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable several functions, including ATP binding activity; DNA binding activity; and DNA helicase activity. Predicted to be involved in nucleotide-excision repair. Predicted to be located in nucleus. Is an ortholog of C. elegans xpd-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN01520
    Corresponding_CDS_history: CBN01520:np197
    Corresponding_transcript: CBN01520.1
    Other_sequence (39)
  Experimental_info: Microarray_results: GPL14142_CBN01520_1139-1198_0.895_21_C
      GPL14142_CBN01520_1470-1529_0.880_28_B
      GPL14142_CBN01520_1606-1665_0.923_7_A
  Method: Gene