WormBase Tree Display for Gene: WBGene00142577

WBGene00142577 SMap: S_parent: Sequence: Cbre_Contig9
  Identity: Version: 1
    Name: CGC_name: Cbn-unc-58 From_analysis: Inferred_from_orthology
      Sequence_name: CBN03852
      Molecular_name: CBN03852
        CBN03852.1
        CN19205
      Other_name: CBN03852
      Public_name: Cbn-unc-58
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:29 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-unc-58
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0.62378 From_analysis (2)
        1.24756 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 13.4955 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        13.6117 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        13.7918 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        14.5156 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        15.9621 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
      WBls:0000038 5.7768 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        6.04124 From_analysis (2)
        6.30568 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (16)
      WBls:0000101 1.59052 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        2.04795 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00205273
      00205274
      00205275
    Ortholog: WBGene00006689 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00006792 Caenorhabditis elegans From_analysis (4)
      WBGene00025136 Caenorhabditis briggsae From_analysis (3)
      WBGene00063130 Caenorhabditis remanei From_analysis (4)
      WBGene00064316 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00109255 Pristionchus pacificus From_analysis (2)
      WBGene00125641 Caenorhabditis japonica From_analysis (3)
      CBOVI.g11756 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g14042 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g9818 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g17685 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g20570 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g25070 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12710 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g1841 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g5687 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g15907 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00262.g8071 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-58 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g13666 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00147.g5613 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_01385 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_023521 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12851 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g5859 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0065710 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00109263 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00225885 Brugia malayi From_analysis: WormBase-Compara
      chrX_pilon.g19850 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00241052 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00266442 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00288331 Trichuris muris From_analysis: WormBase-Compara
    Paralog (65)
    Structured_description: Automated_description: Predicted to enable potassium channel activity. Predicted to be involved in potassium ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans unc-58. In C. elegans, unc-58 is involved in several processes, including muscle contraction; parturition; and regulation of muscle contraction. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN03852
    Corresponding_transcript: CBN03852.1
    Other_sequence (26)
  Experimental_info: Microarray_results: GPL14142_CBN03852_975-1034_0.893_23_C
      GPL14142_CBN03852_1219-1278_0.911_11_B
      GPL14142_CBN03852_1324-1383_0.926_5_A
  Method: Gene