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WormBase Tree Display for Gene: WBGene00143250

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Name Class

WBGene00143250SMapS_parentSequenceCbre_Contig11
IdentityVersion1
NameCGC_nameCbn-tfg-1From_analysisInferred_from_orthology
Sequence_nameCBN04525
Molecular_nameCBN04525
CBN04525.1
CN05646
Other_nameCBN04525
Public_nameCbn-tfg-1
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-tfg-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtfg
RNASeq_FPKMWBls:0000002 (11)
WBls:0000004169.068From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
84.534From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
43.5315From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
50.6824From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
51.7357From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
57.0861From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
64.8735From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
WBls:0000038195.495From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
196.298From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
197.102From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (17)
WBls:0000101109.506From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
123.905From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00205816
00205817
00205818
Ortholog (20)
Structured_descriptionAutomated_descriptionPredicted to enable identical protein binding activity. Predicted to be involved in COPII vesicle coating. Is an ortholog of C. elegans tfg-1. In C. elegans, tfg-1 is involved in several processes, including cellular localization; regulation of cell growth; and regulation of cell size.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN04525
Corresponding_transcriptCBN04525.1
Other_sequence (36)
Experimental_infoMicroarray_resultsGPL14142_CBN04525_944-1003_0.526_172_A
GPL14142_CBN04525_1127-1186_0.530_168_C
GPL14142_CBN04525_1147-1206_0.638_90_B
MethodGene