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WormBase Tree Display for Gene: WBGene00143378

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Name Class

WBGene00143378SMapS_parentSequenceCbre_Contig7
IdentityVersion1
NameCGC_nameCbn-cgh-1From_analysisInferred_from_orthology
Sequence_nameCBN04653
Molecular_nameCBN04653
CBN04653.1
CN00371
Other_nameCBN04653
Public_nameCbn-cgh-1
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-cgh-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcgh
RNASeq_FPKMWBls:0000002 (11)
WBls:0000004134.55From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
67.275From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
25.4623From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
28.8266From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
33.5886From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
35.5662From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
35.8033From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
WBls:000003839.3606From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
39.5438From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
39.7271From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (17)
WBls:0000101278.888From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
59.476From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00205944
00205945
Ortholog (41)
Paralog (45)
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and nucleic acid binding activity. Is an ortholog of C. elegans cgh-1. In C. elegans, cgh-1 is involved in several processes, including P-body assembly; determination of adult lifespan; and negative regulation of translation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN04653
Corresponding_transcriptCBN04653.1
Other_sequence (76)
Experimental_infoMicroarray_resultsGPL14142_CBN04653_846-905_0.912_7_C
GPL14142_CBN04653_920-979_0.943_1_A
GPL14142_CBN04653_924-983_0.933_3_B
MethodGene