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WormBase Tree Display for Gene: WBGene00143884

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Name Class

WBGene00143884SMapS_parentSequenceCbre_Contig661
IdentityVersion2
NameCGC_nameCbn-serr-1.1From_analysisInferred_from_orthology
Sequence_nameCBN05159
Molecular_nameCBN05159
CBN05159.1
CN07769
Public_nameCbn-serr-1.1
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:50WBPerson4055EventImportedfrom NGASP
204 Jun 2020 14:38:22WBPerson1983Name_changeCGC_nameCbn-serr-1.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classserr
RNASeq_FPKMWBls:00000021.60796From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
1.63086From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
2.29316From_analysisRNASeq.brenneri.WBls:0000002.control_median
2.75363From_analysisRNASeq.brenneri.WBls:0000002.control_mean
2.95546From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
3.50497From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
4.54347From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
5.89224From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
7.40131From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
WBls:00000041.44091From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
2.88182From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
2.99953From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
3.42814From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
3.85464From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
4.63268From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
5.57927From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
WBls:00000388.31326From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
9.14524From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
9.97723From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (14)
WBls:00001013.50497From_analysisRNASeq.brenneri.total_over_all_stages.control_median
3.89337From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
Ortholog (27)
Paralog (11)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Tryptophan synthase beta subunit-like PLP-dependent enzyme and Pyridoxal-phosphate dependent enzyme. Is an ortholog of C. elegans serr-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN05159
Corresponding_transcriptCBN05159.1
Other_sequenceGRC00091_1
AW505795.1
Experimental_infoMicroarray_resultsGPL14142_CBN05159_674-733_0.950_1_C
MethodGene