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WormBase Tree Display for Gene: WBGene00144198

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Name Class

WBGene00144198SMapS_parentSequenceCbre_Contig12
IdentityVersion2
NameCGC_nameCbn-clpf-1From_analysisInferred_from_orthology
Sequence_nameCBN05473
Molecular_nameCBN05473
CBN05473.1
CN15404
Public_nameCbn-clpf-1
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:50WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:10WBPerson4025Name_changeCGC_nameCbn-clpf-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclpf
RNASeq_FPKMWBls:0000002 (11)
WBls:000000414.7695From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
29.539From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:000002411.887From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
13.6979From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
15.0623From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
24.1248From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
24.3749From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
WBls:000003832.5241From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
33.405From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
34.286From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (17)
WBls:000010117.9875From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
18.8986From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00206665
Ortholog (28)
ParalogWBGene00143441Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00143163Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193852Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in mRNA 3'-end processing. Is an ortholog of C. elegans clpf-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN05473
Corresponding_transcriptCBN05473.1
Other_sequence (27)
Experimental_infoMicroarray_resultsGPL14142_CBN05473_584-643_0.808_67_A
GPL14142_CBN05473_655-714_0.737_100_C
GPL14142_CBN05473_757-816_0.907_13_B
MethodGene