WormBase Tree Display for Gene: WBGene00146038

WBGene00146038 SMap: S_parent: Sequence: Cbre_Contig135
  Identity: Version: 2
    Name: CGC_name: Cbn-unc-42 From_analysis: Inferred_from_orthology
      Sequence_name: CBN07313
      Molecular_name: CBN07313
        CBN07313.1
        CN13855
      Public_name: Cbn-unc-42
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:51 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-unc-42
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 1.92142 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        3.84284 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 11.1096 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        12.4793 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        13.3864 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        13.9109 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        14.1291 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
      WBls:0000038 0.658158 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        1.70249 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        2.74683 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (11)
      WBls:0000101 0.658158 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        1.46527 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00208089
    Ortholog: WBGene00006778 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00038604 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00062879 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00135228 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      CBOVI.g1096 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g4624 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g9632 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g4818 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g18360 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g3352 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8199 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g7966 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g12452 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g23776 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_01040.g15468 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-42 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g17652 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00614.g13578 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_09640 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_016951 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00121 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g6476 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50256400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00102515 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00228192 Brugia malayi From_analysis: WormBase-Compara
      chrV_pilon.g15335 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00243065 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00249156 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00257909 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00294422 Trichuris muris From_analysis: WormBase-Compara
      WBGene00296487 Trichuris muris From_analysis: WormBase-Compara
    Paralog (20)
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Is an ortholog of C. elegans unc-42. In C. elegans, unc-42 is involved in several processes, including larval locomotory behavior; neuron differentiation; and positive regulation of transcription by RNA polymerase II. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN07313
    Corresponding_transcript: CBN07313.1
    Other_sequence: Dviv_isotig10702
      JI178167.1
  Experimental_info: Microarray_results: GPL14142_CBN07313_268-327_0.907_16_A
      GPL14142_CBN07313_562-621_0.952_2_C
      GPL14142_CBN07313_723-782_0.952_1_B
  Method: Gene