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WormBase Tree Display for Gene: WBGene00149394

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Name Class

WBGene00149394SMapS_parentSequenceCbre_Contig19
IdentityVersion1
NameCGC_nameCbn-swp-1From_analysisInferred_from_orthology
Sequence_nameCBN10669
Molecular_nameCBN10669
CBN10669.1
CN17011
Other_nameCBN10669
Public_nameCbn-swp-1
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-swp-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classswp
RNASeq_FPKMWBls:0000002 (11)
WBls:000000419.1912From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
38.3825From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:000002414.6771From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
15.4081From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
18.7577From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
35.6484From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
38.9545From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
WBls:000003811.3613From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
12.1035From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
12.8458From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (16)
WBls:00001013.70701From_analysisRNASeq.brenneri.total_over_all_stages.control_median
7.66741From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00210851
00210852
Ortholog (25)
ParalogWBGene00152340Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00191301Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity. Predicted to be involved in RNA processing. Is an ortholog of C. elegans swp-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN10669
Corresponding_transcriptCBN10669.1
Other_sequence (23)
Experimental_infoMicroarray_resultsGPL14142_CBN10669_996-1055_0.861_23_B
GPL14142_CBN10669_1086-1145_0.860_24_C
GPL14142_CBN10669_1236-1295_0.757_119_A
MethodGene