WormBase Tree Display for Gene: WBGene00156717

WBGene00156717 SMap: S_parent: Sequence: Cbre_Contig114
  Identity: Version: 2
    Name: CGC_name: Cbn-dhp-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN17992
      Molecular_name: CBN17992
        CBN17992.1
        CN05225
      Public_name: Cbn-dhp-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:52 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-dhp-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dhp
    RNASeq_FPKM: WBls:0000002 0.274029 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        0.392538 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        0.525373 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        0.559587 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        1.26279 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
            RNASeq.brenneri.WBls:0000002.control_median
      WBls:0000004 0.085878 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0.171755 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        3.15453 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        5.54681 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        7.15314 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        9.21465 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        9.87636 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 4.04124 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        4.8152 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        5.58916 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (17)
      WBls:0000101 2.14005 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        4.31603 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00216701
      00216702
      00216703
    Ortholog (27)
    Paralog: WBGene00151560 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00194750 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00159283 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00139194 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00155164 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds. Predicted to be located in cytoplasm. Is an ortholog of C. elegans dhp-1. In C. elegans, dhp-1 is involved in pyrimidine nucleobase catabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN17992
    Corresponding_transcript: CBN17992.1
    Other_sequence: SS02787
      CV199423.1
      PVC02682_1
      PVC00435_1
      EL890153.1
  Experimental_info: Microarray_results: GPL14142_CBN17992_1026-1085_0.817_40_C
      GPL14142_CBN17992_1105-1164_0.843_33_B
      GPL14142_CBN17992_1363-1422_0.725_81_A
  Method: Gene