WormBase Tree Display for Gene: WBGene00157136

WBGene00157136 SMap: S_parent: Sequence: Cbre_Contig146
  Identity: Version: 1
    Name: CGC_name: Cbn-ccf-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN18411
      Molecular_name: CBN18411
        CBN18411.1
        CN01418
      Other_name: CBN18411
      Public_name: Cbn-ccf-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-ccf-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ccf
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 140.696 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        70.348 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        36.7322 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        38.2252 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        42.014 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        43.2486 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        48.693 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
      WBls:0000038 52.2209 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        53.3904 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        54.56 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (17)
      WBls:0000101 39.549 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        47.8006 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00217049
      00217050
      00217051
    Ortholog (46)
    Structured_description: Automated_description: Predicted to enable nucleic acid binding activity and poly(A)-specific ribonuclease activity. Predicted to be part of CCR4-NOT complex. Is an ortholog of C. elegans ccf-1. In C. elegans, ccf-1 is involved in nuclear-transcribed mRNA poly(A) tail shortening and oogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN18411
    Corresponding_transcript: CBN18411.1
    Other_sequence (56)
  Experimental_info: Microarray_results: GPL14142_CBN18411_529-588_0.938_7_B
      GPL14142_CBN18411_608-667_0.952_2_A
      GPL14142_CBN18411_712-771_0.949_3_C
  Method: Gene