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WormBase Tree Display for Gene: WBGene00161208

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Name Class

WBGene00161208SMapS_parentSequenceCbre_Contig464
IdentityVersion2
NameCGC_nameCbn-pmlr-1.2From_analysisInferred_from_orthology
Sequence_nameCBN22483
Molecular_nameCBN22483
CBN22483.1
CN28990
Public_nameCbn-pmlr-1.2
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:52WBPerson4055EventImportedfrom NGASP
204 Jun 2020 14:38:22WBPerson1983Name_changeCGC_nameCbn-pmlr-1.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpmlr
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
20.461From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
40.9219From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:000002415.4262From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
19.0805From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
19.9562From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
24.1874From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
25.4167From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
WBls:000003817.6657From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
19.1502From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
20.6347From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (15)
WBls:000010111.9766From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
9.14279From_analysisRNASeq.brenneri.total_over_all_stages.control_median
Ortholog (25)
ParalogWBGene00162550Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00158795Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00161611Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00191255Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: SMAD/FHA domain superfamily; FHA domain; and Forkhead-associated (FHA) domain. Is an ortholog of C. elegans pmlr-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN22483
Corresponding_CDS_historyCBN22483:np197
Corresponding_transcriptCBN22483.1
Other_sequence (36)
MethodGene