WormBase Tree Display for Gene: WBGene00162862

WBGene00162862 SMap: S_parent: Sequence: Cbre_Contig188
  Identity: Version: 2
    Name: Sequence_name: CBN24137
      Molecular_name: CBN24137
        CBN24137.1
        CN20986
      Other_name: CBN24137
      Public_name: CBN24137
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-syn-13
        2 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Removed
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        26.0766 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        52.1532 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 14.0746 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        14.4152 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        17.6094 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        18.3479 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        23.4635 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 39.2587 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        40.2836 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        41.3085 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (16)
      WBls:0000101 12.8684 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        18.3406 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00221761
      00221762
    Ortholog (30)
    Paralog: WBGene00154002 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00159566 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00141035 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00152874 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00155736 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00155789 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00156518 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00158202 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00158857 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00193180 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in vesicle-mediated transport. Predicted to be located in membrane. Is an ortholog of C. elegans syx-7. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN24137
    Corresponding_transcript: CBN24137.1
    Other_sequence: GPC02813_1
      CJC09080_1
      Dviv_contig08200
      ES413290.1
      EX557852.1
      Hbac_isotig04380
      GP02356
      SSC04830_1
      HBC02106_1
      SS03078
  Remark: [180319 gw3] The CGC name Cbn-syn-13 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson4025
  Method: Gene