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WormBase Tree Display for Gene: WBGene00163427

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Name Class

WBGene00163427SMapS_parentSequenceCbre_Contig112
IdentityVersion2
NameCGC_nameCbn-idha-1.1From_analysisInferred_from_orthology
Sequence_nameCBN24702
Molecular_nameCBN24702
CBN24702.1
CN27014
Public_nameCbn-idha-1.1
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:52WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameCbn-idha-1.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classidha
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
25.367From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
50.734From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
64.7837From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
66.2913From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
68.4618From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
76.8451From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
79.0794From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
WBls:0000038128.009From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
129.511From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
131.013From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (17)
WBls:000010178.6744From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
92.7914From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00222216
Ortholog (34)
ParalogWBGene00141005Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00139599Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00145154Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00161173Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in tricarboxylic acid cycle. Is an ortholog of C. elegans idha-1. In C. elegans, idha-1 is involved in protein folding.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN24702
Corresponding_CDS_historyCBN24702:np197
Corresponding_transcriptCBN24702.1
Other_sequence (46)
Experimental_infoMicroarray_resultsGPL14142_CBN02280_520-579_0.911_5_C
GPL14142_CBN02280_903-962_0.824_38_B
GPL14142_CBN02280_995-1054_0.611_106_A
MethodGene