WormBase Tree Display for Gene: WBGene00163782

WBGene00163782 SMap: S_parent: Sequence: Cbre_Contig33
  Identity: Version: 2
    Name: CGC_name: Cbn-crt-1.2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN25057
      Molecular_name: CBN25057
        CBN25057.1
        CN24166
      Other_name: CBN25057
        Cbn-crt-1 From_analysis: Inferred_from_orthology
      Public_name: Cbn-crt-1.2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-crt-1
        2 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Cbn-crt-1.2
                Other_name: Cbn-crt-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: crt
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 189.748 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        94.874 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 155.383 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        159.546 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        159.863 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        387.136 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        432.652 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
      WBls:0000038 481.985 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        520.835 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        559.685 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (17)
      WBls:0000101 215.347 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
        218.049 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
    GO_annotation: 00222511
      00222512
      00222513
      00222514
    Ortholog (34)
    Paralog: WBGene00149953 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00163673 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable calcium ion binding activity and unfolded protein binding activity. Predicted to be involved in protein folding. Predicted to be located in endoplasmic reticulum. Is an ortholog of C. elegans crt-1. In C. elegans, crt-1 is involved in several processes, including IRE1-mediated unfolded protein response; determination of adult lifespan; and hemidesmosome assembly. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN25057
    Corresponding_transcript: CBN25057.1
    Other_sequence (218)
  Method: Gene