WormBase Tree Display for Gene: WBGene00163972

WBGene00163972 SMap: S_parent: Sequence: Cbre_Contig110
  Identity: Version: 2
    Name: CGC_name: Cbn-magu-3 From_analysis: Inferred_from_orthology
      Sequence_name: CBN25247
      Molecular_name: CBN25247
        CBN25247.1
        CN29780
      Public_name: Cbn-magu-3
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:52 WBPerson4055 Event: Imported: from NGASP
        2 07 Feb 2012 16:36:56 WBPerson2970 Name_change: CGC_name: Cbn-magu-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: magu
    RNASeq_FPKM: WBls:0000002 0.401091 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        0.499565 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
        0.647427 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        0.795289 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        0.82266 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        0.952966 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        1.60035 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        1.9702 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        2.00714 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
      WBls:0000004 1.31649 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        2.63298 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 12.4967 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        12.7041 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        15.3325 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        17.6706 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        18.6113 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
      WBls:0000038 1.30879 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        2.2427 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        3.1766 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (11)
      WBls:0000101 0.379004 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        0.757162 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog (33)
    Paralog: WBGene00143599 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00153410 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00154077 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00175044 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00139950 Caenorhabditis brenneri From_analysis: GeneACeDB-Compara
      WBGene00151782 Caenorhabditis brenneri From_analysis: GeneACeDB-Compara
      WBGene00160686 Caenorhabditis brenneri From_analysis: GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Guanylate kinase/L-type calcium channel beta subunit; Guanylate kinase; SH3-like domain superfamily; and P-loop containing nucleoside triphosphate hydrolase. Is an ortholog of C. elegans magu-3. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN25247
    Corresponding_CDS_history: CBN25247:np197
    Corresponding_transcript: CBN25247.1
    Other_sequence (15)
  Experimental_info: Microarray_results: GPL14142_CBN25247_859-918_0.924_6_C
      GPL14142_CBN25247_1058-1117_0.928_4_A
      GPL14142_CBN25247_1176-1235_0.943_1_B
  Method: Gene