WormBase Tree Display for Gene: WBGene00180915

WBGene00180915 SMap: S_parent: Sequence: Cjap.Contig17232
  Identity: Version: 3
    Name: CGC_name: Cjp-ubc-16 From_analysis: Inferred_from_orthology
      Sequence_name: CJA25343
      Molecular_name: CJA25343
        CJA25343.1
        JA67206
      Public_name: Cjp-ubc-16
    Species: Caenorhabditis japonica
    History: Version_change: 1 22 Jan 2009 15:16:36 WBPerson4055 Event: Imported: from WASHU
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
        3 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cjp-ubc-16
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ubc
    RNASeq_FPKM: WBls:0000004 19.9728 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 11.865 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 7.21483 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        8.43091 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        9.647 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 11.853 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        12.8639 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        13.3331 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        13.6292 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        13.9252 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        21.2798 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        35.1298 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        37.5885 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        38.9404 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        6.6047 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
      WBls:0000101 12.8639 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        16.8414 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00224561
    Ortholog (27)
    Paralog (15)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Ubiquitin-conjugating enzyme E2; Ubiquitin-conjugating enzyme/RWD-like; Ubiquitin-conjugating enzyme; WD40-repeat-containing domain superfamily; and Ribosomal RNA-processing protein Rrp9-like. Is an ortholog of C. elegans ubc-16. In C. elegans, ubc-16 is involved in protein ubiquitination. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA25343
    Corresponding_transcript: CJA25343.1
    Other_sequence (43)
  Experimental_info: Expr_pattern: Expr1070346
      Expr1079986
    Microarray_results: GPL14145_CJA06640_339-398_0.881_7_B
      GPL14145_CJA06640_403-462_0.897_6_A
      GPL14145_CJA25343_350-409_0.951_1_A
  Method: Gene