WormBase Tree Display for Gene: WBGene00190072

WBGene00190072 SMap: S_parent: Sequence: Cbre_Contig62
  Identity: Version: 2
    Name: CGC_name: Cbn-vpat-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN28107
      Molecular_name: CBN28107
        CBN28107.1
        CN35009
      Public_name: Cbn-vpat-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 20 May 2009 11:55:52 WBPerson1847 Event: Created
        2 29 Nov 2016 12:34:27 WBPerson2970 Name_change: CGC_name: Cbn-vpat-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vpat
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0.85172 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        1.70344 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        4.5372 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        5.81823 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        6.27247 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        6.42741 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        8.36801 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 7.56462 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        7.81952 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        8.07442 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (15)
      WBls:0000101 1.99076 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        3.04684 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00225648
      00225649
    Ortholog (28)
    Paralog: WBGene00150053 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00156191 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00161361 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00142525 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00143354 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00156258 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00160219 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00192258 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00195044 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Is an ortholog of C. elegans vpat-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN28107
    Corresponding_transcript: CBN28107.1
    Other_sequence (31)
  Experimental_info: Microarray_results: GPL14142_CBN28107_1458-1517_0.919_3_C
      GPL14142_CBN28107_1694-1753_0.920_2_B
      GPL14142_CBN28107_1735-1794_0.868_17_A
  Method: Gene