WormBase Tree Display for Gene: WBGene00190323

WBGene00190323 SMap: S_parent: Sequence: Cbre_Contig452
  Identity: Version: 6
    Name: CGC_name: Cbn-lam-3 From_analysis: Inferred_from_orthology
      Sequence_name: CBN28358
      Molecular_name: CBN28358
        CBN28358.1
        CN36677
      Public_name: Cbn-lam-3
    Species: Caenorhabditis brenneri
    History: Version_change: 1 20 May 2009 11:55:52 WBPerson1847 Event: Created
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-lam-3
        3 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:22 WBPerson1983 Name_change: CGC_name: Cbn-lam-3
        5 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:27 WBPerson1983 Name_change: CGC_name: Cbn-lam-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lam
    RNASeq_FPKM: WBls:0000002 0.348744 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        0.422949 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        0.497155 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        0.518547 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        0.695744 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        0.933518 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        0.99725 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        1.71306 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        2.93449 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        5.86898 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 0.252652 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        0.329632 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        0.614845 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        1.21207 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        1.59495 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
      WBls:0000038 0.276085 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        0.482829 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        0.689573 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 0.032009 From_analysis: RNASeq.brenneri.WBls:0000041.control_mean
        0.059028 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
        0.070409 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
        0.097224 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
        0.116462 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
        0.169018 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
        0 From_analysis (12)
      WBls:0000101 0.404266 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
    Ortholog (36)
    Paralog (24)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Galactose-binding-like domain superfamily; Laminin, N-terminal; Laminin-type EGF domain; Laminin EGF domain; and Laminin N-terminal (Domain VI). Is an ortholog of C. elegans lam-3. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN28358
    Corresponding_transcript: CBN28358.1
    Other_sequence: MJC01071_1
      Tcir_isotig13435
      MJ02038
      BMC15681_1
      BMC07682_1
      Dviv_isotig32858
      JI169098.1
  Experimental_info: Microarray_results: GPL14142_CBN28358_1194-1253_0.922_21_C
      GPL14142_CBN28358_1363-1422_0.939_8_A
      GPL14142_CBN28358_1521-1580_0.964_1_B
  Remark: [190208 pad] The CGC name Cbn-lam-3 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Cbn-lam-3 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene