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WormBase Tree Display for Gene: WBGene00190956

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Name Class

WBGene00190956SMapS_parentSequenceCbre_Contig1546
IdentityVersion1
NameSequence_nameCBN28991
Molecular_nameCBN28991
CBN28991.1
CN18126
Public_nameCBN28991
SpeciesCaenorhabditis brenneri
HistoryVersion_change120 May 2009 11:55:52WBPerson1847EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040.174678From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0.349356From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
2.66089From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
3.03723From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
4.4583From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
4.71743From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
5.47817From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
WBls:00000384.08504From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
4.65055From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
5.21606From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (17)
WBls:000010114.2959From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
9.82901From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00226629
00226630
00226631
Ortholog (35)
ParalogWBGene00146289Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable NAD binding activity and UDP-glucose 6-dehydrogenase activity. Is an ortholog of C. elegans sqv-4. In C. elegans, sqv-4 is involved in several processes, including egg-laying behavior; glycosaminoglycan biosynthetic process; and vulval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN28991
Corresponding_transcriptCBN28991.1
Other_sequence (24)
Experimental_infoMicroarray_resultsGPL14142_CBN07564_880-939_0.913_6_C
GPL14142_CBN07564_1258-1317_0.931_3_A
GPL14142_CBN07564_1303-1362_0.924_4_B
MethodGene