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WormBase Tree Display for Gene: WBGene00192600

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Name Class

WBGene00192600SMapS_parentSequenceCbre_Contig72
IdentityVersion2
NameCGC_nameCbn-unc-132From_analysisInferred_from_orthology
Sequence_nameCBN30635
Molecular_nameCBN30635
CBN30635.1
CN36217
Public_nameCbn-unc-132
SpeciesCaenorhabditis brenneri
HistoryVersion_change120 May 2009 11:55:53WBPerson1847EventCreated
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbn-unc-132
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:0000002 (11)
WBls:000000418.7457From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
37.4914From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
24.6999From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
27.2622From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
36.1316From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
38.9639From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
45.5503From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:000003836.4082From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
36.7566From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
37.1051From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (17)
WBls:000010124.8988From_analysisRNASeq.brenneri.total_over_all_stages.control_median
29.7671From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
OrthologWBGene00021078Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00028907Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00058141Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00066688Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00066689Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00069748Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00126924Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g1043Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g12655Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g761Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g22006Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17615Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g1096Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16936Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g786Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g7626Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g45Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00137.g5353Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-132Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g7612Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01743.g22862Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_05403Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_019173Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01703Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g13842Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50007200Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00226492Brugia malayiFrom_analysisWormBase-Compara
chrV_pilon.g13812Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00240582Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00276564Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00257051Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00258466Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00258751Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00193839Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: CYTH-like domain superfamily; NadR/Ttd14, AAA domain; P-loop containing nucleoside triphosphate hydrolase; and AAA domain. Is an ortholog of C. elegans unc-132.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN30635
Corresponding_transcriptCBN30635.1
Other_sequenceEX912579.1
CRC05117_1
FG979383.1
HBC19215_1
FF679790.1
JI178790.1
Dviv_isotig12819
HBC20502_1
HBC02621_1
Experimental_infoMicroarray_resultsGPL14142_CBN30635_1364-1423_0.862_39_A
MethodGene