WormBase Tree Display for Gene: WBGene00194710
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| WBGene00194710 | SMap | S_parent | Sequence | C30B5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mks-2 | Person_evidence | WBPerson2136 | |||||
| Sequence_name | C30B5.9 | ||||||||
| Molecular_name | C30B5.9 | ||||||||
| C30B5.9.1 | |||||||||
| CE45825 | |||||||||
| Other_name | CELE_C30B5.9 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | mks-2 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00194710 | |||||
| NDB | locus_tag | CELE_C30B5.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00194710|UniProtKB=C8JQP7 | |||||||
| family | PTHR13531 | ||||||||
| NCBI | gene | 13185304 | |||||||
| RefSeq | protein | NM_001267179.4 | |||||||
| TrEMBL | UniProtAcc | C8JQP7 | |||||||
| UniProt_GCRP | UniProtAcc | C8JQP7 | |||||||
| OMIM | gene | 613277 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 11 Aug 2009 12:32:47 | WBPerson1867 | Event | Created | |||
| 2 | 20 Dec 2011 16:46:04 | WBPerson2970 | Name_change | CGC_name | mks-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mks | ||||||||
| Allele (12) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00007025 | ||||||||
| 00007026 | |||||||||
| 00007027 | |||||||||
| 00007028 | |||||||||
| 00007029 | |||||||||
| 00007030 | |||||||||
| 00007031 | |||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00022733 | Caenorhabditis elegans | From_analysis | Panther | |||||
| Structured_description | Automated_description | Involved in non-motile cilium assembly and protein localization to ciliary transition zone. Located in ciliary transition zone. Human ortholog(s) of this gene implicated in Joubert syndrome 2 and Meckel syndrome 2. Is an ortholog of human TMEM216 (transmembrane protein 216). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110988 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25018) | ||||
| DOID:0070116 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25018) | ||||||
| DOID:0050777 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25018) | ||||||
| Molecular_info | Corresponding_CDS | C30B5.9 | |||||||
| Corresponding_CDS_history | C30B5.9:wp224 | ||||||||
| Corresponding_transcript | C30B5.9.1 | ||||||||
| Associated_feature | WBsf650119 | ||||||||
| WBsf665242 | |||||||||
| WBsf988101 | |||||||||
| WBsf988102 | |||||||||
| WBsf988103 | |||||||||
| Experimental_info | Expr_pattern | Expr1145552 | |||||||
| Expr2013583 | |||||||||
| Expr2031816 | |||||||||
| Microarray_results | 181850_at | ||||||||
| Aff_C30B5.6 | |||||||||
| GPL19516_CGZ0006717 | |||||||||
| GPL21109_C30B5.9 | |||||||||
| Expression_cluster (91) | |||||||||
| Map_info | Map | II | Position | -0.400561 | |||||
| Positive | Positive_clone | C30B5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00040522 | ||||||||
| WBPaper00046659 | |||||||||
| WBPaper00048909 | |||||||||
| WBPaper00049218 | |||||||||
| WBPaper00049372 | |||||||||
| WBPaper00052057 | |||||||||
| WBPaper00053681 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060708 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
