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WormBase Tree Display for Gene: WBGene00195018

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Name Class

WBGene00195018SMapS_parentSequenceF44A2
IdentityVersion2
NameCGC_namesrpr-3
Sequence_nameF44A2.8
Molecular_nameF44A2.8
Other_nameCELE_F44A2.8Accession_evidenceNDBBX284605
Public_namesrpr-3
DB_infoDatabaseNDBlocus_tagCELE_F44A2.8
NCBIgene13214340
RefSeqproteinNR_069178.1
RNAcentralURSidURS00000D8834
SpeciesCaenorhabditis elegans
HistoryVersion_change125 Feb 2010 16:19:56WBPerson1867EventCreated
212 Nov 2018 16:28:49WBPerson1983Name_changeCGC_namesrpr-3
StatusLive
Gene_infoBiotypeSO:0001263
Gene_classsrpr
Allele (14)
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionEnriched in AVK based on RNA-seq studies. Is affected by several genes including pgl-1; alg-1; and glh-1 based on RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptF44A2.8
Other_sequenceJI179712.1
Tcol_isotig18048
DW677757.1
Dviv_isotig35941
BF727619.1
NAC02604_1
AI249203.1
OVC02529_1
Tcir_isotig32780
Experimental_infoMicroarray_resultsGPL21109_F44A2.13
Expression_clusterWBPaper00050370:dpy-21(e428)_L3_downregulated
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00054493:hpl-2(tm1489)_downregulated
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055565:AVK_enriched
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00058725:sftb-1(cer39)_upregulated
Map_infoPositivePositive_cloneF44A2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV1.97713
MethodGene