WormBase Tree Display for Gene: WBGene00196015
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| WBGene00196015 | SMap | S_parent | Sequence | Y67D8A | ||||
|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | ||||||
| Name | Sequence_name | Y67D8A.6 | ||||||
| Molecular_name | Y67D8A.6 | |||||||
| Other_name | CELE_Y67D8A.6 | Accession_evidence | NDB | BX284604 | ||||
| Public_name | Y67D8A.6 | |||||||
| DB_info | Database | NDB | locus_tag | CELE_Y67D8A.6 | ||||
| NCBI | gene | 13192563 | ||||||
| RefSeq | protein | NR_053030.1 | ||||||
| RNAcentral | URSid | URS0000569836 | ||||||
| Species | Caenorhabditis elegans | |||||||
| History | Version_change | 1 | 06 Oct 2010 16:59:19 | WBPerson4025 | Event | Created | ||
| Status | Live | |||||||
| Gene_info | Biotype | SO:0001263 | ||||||
| Allele | WBVar02151441 | |||||||
| WBVar00090890 | ||||||||
| WBVar02151678 | ||||||||
| WBVar02151687 | ||||||||
| WBVar01498316 | ||||||||
| WBVar01499789 | ||||||||
| WBVar01499633 | ||||||||
| WBVar00897400 | ||||||||
| WBVar00897401 | ||||||||
| RNASeq_FPKM (74) | ||||||||
| Structured_description | Automated_description | Is affected by several genes including pgl-1; cep-1; and glh-1 based on RNA-seq and microarray studies. Is affected by Oligosaccharides based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | |||||||
| WBPerson37462 | ||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
| Molecular_info | Corresponding_transcript | Y67D8A.6 | ||||||
| Other_sequence | FC812309.1 | |||||||
| Associated_feature | WBsf645860 | |||||||
| Experimental_info | Expression_cluster | WBPaper00045380:cep-1(gk138)_upregulated_normal | ||||||
| WBPaper00050163:let-418(RNAi)_downregulated_100-cell-embryo | ||||||||
| WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult | ||||||||
| WBPaper00055334:DLC-1_interacting | ||||||||
| WBPaper00056073:NHR-86_interacting_promoter | ||||||||
| WBPaper00056167:ifo-1(kc2)_upregulated | ||||||||
| WBPaper00057149:prgn-1(tm985)_downregulated | ||||||||
| WBPaper00062325:muscle_enriched_noncoding-RNA | ||||||||
| WBPaper00064306:Agaro-oligosaccharides_upregulated | ||||||||
| Interaction | WBInteraction000525170 | |||||||
| WBInteraction000534842 | ||||||||
| WBInteraction000534843 | ||||||||
| WBInteraction000534844 | ||||||||
| WBInteraction000534845 | ||||||||
| WBInteraction000534846 | ||||||||
| WBInteraction000542495 | ||||||||
| Map_info | Positive | Positive_clone | Y67D8A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Interpolated_map_position | IV | -5.44119 | ||||||
| Remark | [101006] This ncRNA gene was created from the '7K ncRNA set' in the modENCODE Integrated Analysis paper. | Paper_evidence | WBPaper00037953 | |||||
| Accession_evidence | modENCODE | ncRNA_frag2566 | ||||||
| Curator_confirmed | WBPerson4025 | |||||||
| Method | Gene |
