WormBase Tree Display for Gene: WBGene00203796
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WBGene00203796 | SMap | S_parent | Sequence | PPA_ChrI | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 6 | |||||||
Name | CGC_name | Ppa-lim-4 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA30930 | ||||||||
Molecular_name | PPA30930 | ||||||||
PPA30930.1 | |||||||||
PP54841 | |||||||||
Other_name | UMM-S7-52.32 | Person_evidence | WBPerson606 | ||||||
Public_name | Ppa-lim-4 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 04 Nov 2010 10:28:59 | WBPerson4055 | Event | Imported | from Assembly 2 | ||
2 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-lim-4 | ||||
3 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
4 | 08 May 2019 10:09:23 | WBPerson1983 | Name_change | CGC_name | Ppa-lim-4 | ||||
5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
6 | 28 Jul 2021 11:12:27 | WBPerson1983 | Name_change | CGC_name | Ppa-lim-4 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | lim | ||||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
GO_annotation | 00231307 | ||||||||
Ortholog (28) | |||||||||
Paralog (9) | |||||||||
Structured_description | Automated_description | Predicted to enable DNA binding activity. Is an ortholog of C. elegans lim-4. In C. elegans, lim-4 is involved in several processes, including cell differentiation; positive regulation of transcription by RNA polymerase II; and serotonin biosynthetic process. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA30930 | |||||||
Corresponding_transcript | PPA30930.1 | ||||||||
Other_sequence (14) | |||||||||
Experimental_info | Microarray_results | GPL14372_Probes_8525 | |||||||
GPL14372_Probes_8526 | |||||||||
GPL14372_Probes_8527 | |||||||||
GPL14372_Probes_8528 | |||||||||
GPL14372_Probes_8530 | |||||||||
GPL14372_Probes_8532 | |||||||||
Remark | [190208 pad] The CGC name Ppa-lim-4 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
[210528 pad] The CGC name Ppa-lim-4 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |