WormBase Tree Display for Gene: WBGene00213158

WBGene00213158 SMap: S_parent: Sequence: Cjap.Contig8050
  Identity: Version: 2
    Name: CGC_name: Cjp-urm-1.2 From_analysis: Inferred_from_orthology
      Sequence_name: CJA37311
      Molecular_name: CJA37311
        CJA37311.1
        JA39815
      Public_name: Cjp-urm-1.2
    Species: Caenorhabditis japonica
    History: Version_change: 1 28 Jul 2011 11:15:56 WBPerson4055 Event: Imported: Augustus import
        2 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Cjp-urm-1.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: urm
    RNASeq_FPKM: WBls:0000004 11.441 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 6.67879 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 0 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
            RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 101.005 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        110.003 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        119.169 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        0 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
            RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        58.1732 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        66.0684 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        66.6834 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        70.0986 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        73.5139 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
      WBls:0000101 11.441 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        42.0513 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00234974
      00234975
    Ortholog: WBGene00055767 Caenorhabditis remanei From_analysis: Inparanoid_8
      WBGene00087417 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00149138 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00185048 Caenorhabditis elegans From_analysis: Inparanoid_8
      FL83_11416 Caenorhabditis latens From_analysis: WormBase-Compara
    Paralog: WBGene00119557 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in tRNA thio-modification. Predicted to be located in cytoplasm. Is an ortholog of C. elegans urm-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA37311
    Corresponding_transcript: CJA37311.1
    Other_sequence: CGC00347_1
  Method: Gene