WormBase Tree Display for Gene: WBGene00219608
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WBGene00219608 | SMap | S_parent | Sequence | T22C1 | ||||
---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | ||||||
Name | CGC_name | linc-58 | Person_evidence | WBPerson6396 | ||||
Sequence_name | T22C1.16 | |||||||
Molecular_name | T22C1.16 | |||||||
Other_name | CELE_T22C1.16 | Accession_evidence | NDB | BX284601 | ||||
Public_name | linc-58 | |||||||
DB_info | Database | NDB | locus_tag | CELE_T22C1.16 | ||||
NCBI | gene | 24104920 | ||||||
RefSeq | protein | NR_101588.1 | ||||||
RNAcentral | URSid | URS000027EBCC | ||||||
Species | Caenorhabditis elegans | |||||||
History | Version_change | 1 | 13 Aug 2012 10:25:36 | WBPerson1983 | Event | Created | ||
Status | Live | |||||||
Gene_info | Biotype | SO:0001641 | ||||||
Gene_class | linc | |||||||
Allele (11) | ||||||||
RNASeq_FPKM (74) | ||||||||
Structured_description | Automated_description | Enriched in AFD and neurons based on RNA-seq studies. Is affected by several genes including cep-1; daf-1; and dpy-21 based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | |||||||
WBPerson37462 | ||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
Molecular_info | Corresponding_transcript | T22C1.16 | ||||||
Experimental_info | Expression_cluster | WBPaper00045380:cep-1(gk138)_upregulated_normal | ||||||
WBPaper00045380:cep-1(gk138)_upregulated_UV | ||||||||
WBPaper00050370:dpy-21(e428)_L3_upregulated | ||||||||
WBPaper00059421:daf-1(m40)_upregulated | ||||||||
WBPaper00060661:hypoxia_downregulated | ||||||||
WBPaper00060811:L1_vs_adult_upregulated_neural | ||||||||
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR | ||||||||
WBPaper00062103:neuron_enriched | ||||||||
WBPaper00065158:AFD_enriched | ||||||||
Map_info | Map | I | Position | 2.41506 | ||||
Positive | Positive_clone | T22C1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Pseudo_map_position | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |