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WormBase Tree Display for Gene: WBGene00219608

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Name Class

WBGene00219608SMapS_parentSequenceT22C1
IdentityVersion1
NameCGC_namelinc-58Person_evidenceWBPerson6396
Sequence_nameT22C1.16
Molecular_nameT22C1.16
Other_nameCELE_T22C1.16Accession_evidenceNDBBX284601
Public_namelinc-58
DB_infoDatabaseNDBlocus_tagCELE_T22C1.16
NCBIgene24104920
RefSeqproteinNR_101588.1
RNAcentralURSidURS000027EBCC
SpeciesCaenorhabditis elegans
HistoryVersion_change113 Aug 2012 10:25:36WBPerson1983EventCreated
StatusLive
Gene_infoBiotypeSO:0001641
Gene_classlinc
Allele (11)
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionEnriched in AFD and neurons based on RNA-seq studies. Is affected by several genes including cep-1; daf-1; and dpy-21 based on RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptT22C1.16
Experimental_infoExpression_clusterWBPaper00045380:cep-1(gk138)_upregulated_normal
WBPaper00045380:cep-1(gk138)_upregulated_UV
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00059421:daf-1(m40)_upregulated
WBPaper00060661:hypoxia_downregulated
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00062103:neuron_enriched
WBPaper00065158:AFD_enriched
Map_infoMapIPosition2.41506
PositivePositive_cloneT22C1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene