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WormBase Tree Display for Gene: WBGene00219711

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Name Class

WBGene00219711SMapS_parentSequenceK06A9
IdentityVersion1
NameCGC_nameanr-49Person_evidenceWBPerson6396
Sequence_nameK06A9.6
Molecular_nameK06A9.6
Other_nameCELE_K06A9.6Accession_evidenceNDBBX284606
Public_nameanr-49
DB_infoDatabaseNDBlocus_tagCELE_K06A9.6
NCBIgene24104723
RefSeqproteinNR_102150.1
RNAcentralURSidURS000048D56B
SpeciesCaenorhabditis elegans
HistoryVersion_change113 Aug 2012 10:25:35WBPerson1983EventCreated
StatusLive
Gene_infoBiotypeSO:0002182
Gene_classanr
Allele (150)
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionIs affected by dpy-21; nfki-1; and etr-1 based on RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptK06A9.6
Experimental_infoRNAi_resultWBRNAi00050036Inferred_automaticallyRNAi_primary
WBRNAi00016660Inferred_automaticallyRNAi_primary
Expression_clusterWBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00059754:E.faecalis_OG1RF_upregulated
WBPaper00060445:nfki-1(cer1)_downregulated_L4
WBPaper00062325:muscle_enriched_noncoding-RNA
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00065841:34_0
WBPaper00065841:34_1
Map_infoMapXPosition-17.9621
PositivePositive_cloneK06A9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Remark[120803 pad] Created as part of a lincRNA and anti-sense RNA data submission from Nam JW, et al 2012.Paper_evidenceWBPaper00041194
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene