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WormBase Tree Display for Gene: WBGene00222569

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Name Class

WBGene00222569SMapS_parentSequenceBm_v4_ChrX_scaffold_001
IdentityVersion6
NameSequence_nameBm2308
Molecular_nameBm2308
Bm2308.1
BM44098
Other_nameBm-sax-7
TAG2308Curator_confirmedWBPerson4055
Bm1_00885ACurator_confirmedWBPerson4055
Bm1_00885Person_evidenceWBPerson5841
Bma-sax-7From_analysisInferred_from_orthology
Public_nameBm2308
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:24WBPerson4055EventCreated
205 Jul 2013 11:43:21WBPerson4055Name_changeCGC_nameBma-sax-7
Other_nameBm-sax-7
320 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameRemoved
404 Feb 2020 15:43:56WBPerson1983Name_changeCGC_nameBma-sax-7
504 Jun 2020 14:38:22WBPerson1983Name_changeCGC_nameBma-sax-7.1
Other_nameBma-sax-7
628 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000009744.4451From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
13.7767From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
17.737From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
17.9926From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
18.2218From_analysisRNASeq.brugia.WBls:0000097.control_median
18.4511From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
27.703From_analysisRNASeq.brugia.WBls:0000097.control_mean
46.0632From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
52.1975From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
WBls:000007813.4451From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
14.6853From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
38.0543From_analysisRNASeq.brugia.WBls:0000078.control_mean
38.7688From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
39.4015From_analysisRNASeq.brugia.WBls:0000078.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
42.2763From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
58.0085From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
59.7944From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
WBls:000008042.8219From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
43.8294From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
44.0048From_analysisRNASeq.brugia.WBls:0000080.control_median
44.1803From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
44.9364From_analysisRNASeq.brugia.WBls:0000080.control_mean
48.914From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
WBls:0000081 (24)
WBls:000008243.3593From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
44.5918From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
55.2017From_analysisRNASeq.brugia.WBls:0000082.control_mean
59.407From_analysisRNASeq.brugia.WBls:0000082.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
63.536From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
65.1143From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
WBls:0000083 (82)
WBls:000009255.6584From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
57.3226From_analysisRNASeq.brugia.WBls:0000092.control_mean
RNASeq.brugia.WBls:0000092.control_median
58.9867From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:000009481.5541From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
82.6865From_analysisRNASeq.brugia.WBls:0000094.control_mean
RNASeq.brugia.WBls:0000094.control_median
83.819From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:000010141.8671From_analysisRNASeq.brugia.total_over_all_stages.control_mean
42.2763From_analysisRNASeq.brugia.total_over_all_stages.control_median
WBls:000066237.6459From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
38.4118From_analysisRNASeq.brugia.WBls:0000662.control_mean
RNASeq.brugia.WBls:0000662.control_median
39.1778From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:000066341.9593From_analysisRNASeq.brugia.WBls:0000663.control_mean
RNASeq.brugia.WBls:0000663.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
Contained_in_operonBMOP2624
Ortholog (110)
ParalogWBGene00222637Brugia malayiFrom_analysisWormBase-Compara
WBGene00223169Brugia malayiFrom_analysisWormBase-Compara
WBGene00225216Brugia malayiFrom_analysisWormBase-Compara
WBGene00226094Brugia malayiFrom_analysisWormBase-Compara
WBGene00227085Brugia malayiFrom_analysisWormBase-Compara
WBGene00227726Brugia malayiFrom_analysisWormBase-Compara
WBGene00228273Brugia malayiFrom_analysisWormBase-Compara
WBGene00228483Brugia malayiFrom_analysisWormBase-Compara
WBGene00231083Brugia malayiFrom_analysisWormBase-Compara
WBGene00269356Brugia malayiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs affected by ivermectin based on RNA-seq studies. Is predicted to encode a protein with the following domains: Fibronectin type III superfamily; Neurofascin/L1/NrCAM, C-terminal domain; Immunoglobulin I-set domain; Immunoglobulin I-set; Fibronectin type III; Immunoglobulin-like fold; Bravo-like intracellular region; Immunoglobulin subtype 2; Immunoglobulin domain; Immunoglobulin-like domain superfamily; Fibronectin type III domain; and Immunoglobulin subtype. Is an ortholog of C. elegans C27B7.7 and igcm-2 and members of the C. elegans zig gene class including zig-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm2308
Corresponding_transcriptBm2308.1
Other_sequence (37)
Experimental_infoExpression_clusterWBPaper00049974:ivermectin_100nM_48h_upregulated
WBPaper00051007:downregulated_M120_vs_F120
ReferenceWBPaper00045439
WBPaper00048750
Remark[180319 gw3] The CGC name Bma-sax-7 was deleted as there was no evidence to support it.Curator_confirmedWBPerson4025
[210528 pad] The CGC name Bma-sax-7.1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene