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WormBase Tree Display for Gene: WBGene00223474

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Name Class

WBGene00223474SMapS_parentSequenceBm_v4_ChrX_scaffold_001
IdentityVersion5
NameSequence_nameBm3213
Molecular_nameBm3213a
Bm3213a.1
BM46725
Bm3213b
BM46304
Bm3213b.1
Other_nameBm-unc-115
TAG3213Curator_confirmedWBPerson4055
Bm1_37735Person_evidenceWBPerson5841
Public_nameBm3213
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:24WBPerson4055EventCreated
205 Jul 2013 11:43:21WBPerson4055Name_change (2)
308 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:23WBPerson1983Name_changeCGC_nameBma-unc-115
528 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000009784.6163From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
121.38From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
145.472From_analysisRNASeq.brugia.WBls:0000097.control_mean
148.035From_analysisRNASeq.brugia.WBls:0000097.control_median
174.69From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
197.627From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
198.066From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
86.0458From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
95.0241From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
WBls:0000078104.559From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
14.6825From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
16.5821From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
51.1629From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
59.0487From_analysisRNASeq.brugia.WBls:0000078.control_mean
59.5379From_analysisRNASeq.brugia.WBls:0000078.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
82.7938From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
84.0229From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
WBls:0000080114.615From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
126.516From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
165.646From_analysisRNASeq.brugia.WBls:0000080.control_mean
167.54From_analysisRNASeq.brugia.WBls:0000080.control_median
208.563From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
212.889From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
WBls:0000081 (24)
WBls:0000082110.644From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
220.051From_analysisRNASeq.brugia.WBls:0000082.control_mean
296.328From_analysisRNASeq.brugia.WBls:0000082.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
301.799From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
302.898From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
88.5851From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
WBls:0000083 (82)
WBls:0000092156.126From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
159.867From_analysisRNASeq.brugia.WBls:0000092.control_mean
RNASeq.brugia.WBls:0000092.control_median
163.608From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
WBls:0000094283.779From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
292.174From_analysisRNASeq.brugia.WBls:0000094.control_mean
RNASeq.brugia.WBls:0000094.control_median
300.569From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:0000101114.615From_analysisRNASeq.brugia.total_over_all_stages.control_median
147.373From_analysisRNASeq.brugia.total_over_all_stages.control_mean
WBls:0000662226.235From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
232.339From_analysisRNASeq.brugia.WBls:0000662.control_mean
RNASeq.brugia.WBls:0000662.control_median
238.443From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:0000663399.184From_analysisRNASeq.brugia.WBls:0000663.control_mean
RNASeq.brugia.WBls:0000663.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
GO_annotation00240371
00240372
OrthologCSP21.g88Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
Pan_g23814Panagrellus redivivusFrom_analysisWormBase-Compara
WBGene00241150Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00266842Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00289797Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable actin binding activity. Predicted to be involved in cytoskeleton organization. Is an ortholog of O. volvulus Ovo-unc-115.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm3213a
Bm3213b
Corresponding_CDS_historyBm3213a:bm266
Bm3213b:bm266
Corresponding_transcriptBm3213a.1
Bm3213b.1
Other_sequence (46)
Experimental_infoExpression_clusterWBPaper00051007:downregulated_M30_vs_L4
WBPaper00061765:L3_vs_Adult_Upregulated
Remark[190208 pad] The CGC name Bma-unc-115 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Bma-unc-115 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene