WormBase Tree Display for Gene: WBGene00223990
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| WBGene00223990 | SMap | S_parent | Sequence | Bm_v4_Chr2_contig_001 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Bma-cpna-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | Bm3729 | ||||||||
| Molecular_name | Bm3729a | ||||||||
| Bm3729a.1 | |||||||||
| BM38586 | |||||||||
| Bm3729b | |||||||||
| BM38463 | |||||||||
| Bm3729c | |||||||||
| BM48431 | |||||||||
| Bm3729b.1 | |||||||||
| Bm3729c.1 | |||||||||
| Other_name | TAG3729 | Curator_confirmed | WBPerson4055 | ||||||
| Bm1_47065A | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_47070A | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_47065 | Person_evidence | WBPerson5841 | |||||||
| Bm1_47070 | Person_evidence | WBPerson5841 | |||||||
| Public_name | Bma-cpna-1 | ||||||||
| Species | Brugia malayi | ||||||||
| History | Version_change | 1 | 10 Dec 2012 14:43:24 | WBPerson4055 | Event | Created | |||
| 2 | 24 Mar 2014 11:31:07 | WBPerson4055 | Name_change | CGC_name | Bma-cpna-1 | ||||
| 3 | 08 Feb 2019 15:42:27 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:25 | WBPerson1983 | Name_change | CGC_name | Bma-cpna-1 | ||||
| 5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Bma-cpna-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cpna | ||||||||
| RNASeq_FPKM (11) | |||||||||
| Contained_in_operon | BMOP1955 | ||||||||
| Ortholog (58) | |||||||||
| Paralog | WBGene00222140 | Brugia malayi | From_analysis | WormBase-Compara | |||||
| WBGene00225997 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| WBGene00227380 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| WBGene00228655 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in body wall based on proteomic studies. Is predicted to encode a protein with the following domains: von Willebrand factor, type A; Copine domain protein CPNA-1; Copine, C-terminal; von Willebrand factor A-like domain superfamily; and Copine. Is an ortholog of C. elegans cpna-1. In C. elegans, cpna-1 is involved in positive regulation of sarcomere organization. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Bm3729a | |||||||
| Bm3729b | |||||||||
| Bm3729c | |||||||||
| Corresponding_CDS_history | Bm3729c:bm271 | ||||||||
| Corresponding_transcript | Bm3729a.1 | ||||||||
| Bm3729b.1 | |||||||||
| Bm3729c.1 | |||||||||
| Other_sequence (42) | |||||||||
| Experimental_info | Expression_cluster | WBPaper00045439:BM_Cluster_P7 | |||||||
| WBPaper00045439:BM_Cluster_P8 | |||||||||
| WBPaper00048706:body-wall-tract_enriched | |||||||||
| WBPaper00051007:upregulated_F120_vs_F30 | |||||||||
| WBPaper00051007:upregulated_F120_vs_F42 | |||||||||
| WBPaper00051007:upregulated_M120_vs_F120 | |||||||||
| WBPaper00051007:upregulated_M120_vs_M30 | |||||||||
| WBPaper00061765:L3_vs_Adult_Downregulated | |||||||||
| WBPaper00061765:L4_vs_Adult_Downregulated | |||||||||
| WBPaper00061765:L4_vs_Micro_Downregulated | |||||||||
| Reference | WBPaper00045439 | ||||||||
| Remark | [190208 pad] The CGC name Bma-cpna-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Bma-cpna-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
