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WormBase Tree Display for Gene: WBGene00224355

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Name Class

WBGene00224355SMapS_parentSequenceBm_v4_Chr2_contig_001
IdentityVersion8
NameCGC_nameBma-tdp-1From_analysisInferred_from_orthology
Sequence_nameBm4094
Molecular_nameBm4094a
Bm4094a.1
BM38338
Bm4094b
BM45720
Bm4094b.1
Other_nameTAG4094Curator_confirmedWBPerson4055
Bm1_13290ACurator_confirmedWBPerson4055
Bm1_17245ACurator_confirmedWBPerson4055
Bm1_17250ACurator_confirmedWBPerson4055
Bm1_17245Person_evidenceWBPerson5841
Bm1_17250Person_evidenceWBPerson5841
Bma-tdp-1.2From_analysisInferred_from_orthology
Public_nameBma-tdp-1
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:24WBPerson4055EventCreated
224 Mar 2014 11:31:06WBPerson4055Name_changeCGC_nameBma-tdp-1
308 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
401 Oct 2019 10:47:49WBPerson1983Name_changeCGC_nameBma-tdp-1
527 Nov 2019 12:48:14WBPerson1983Name_changeCGC_nameBma-tdp-1.2
Other_nameBma-tdp-1
604 Feb 2020 15:43:56WBPerson1983Name_changeCGC_nameBma-tdp-1
Other_nameBma-tdp-1.2
704 Jun 2020 14:38:22WBPerson1983Name_changeCGC_nameRemoved
828 Jul 2021 11:12:28WBPerson1983Name_changeCGC_nameBma-tdp-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtdp
RNASeq_FPKM (11)
GO_annotation00241654
00241655
OrthologPan_g8940Panagrellus redivivusFrom_analysisWormBase-Compara
WBGene00247751Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00257483Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00294219Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00222328Brugia malayiFrom_analysisWormBase-Compara
WBGene00224111Brugia malayiFrom_analysisWormBase-Compara
WBGene00224356Brugia malayiFrom_analysisWormBase-Compara
WBGene00225585Brugia malayiFrom_analysisWormBase-Compara
WBGene00226170Brugia malayiFrom_analysisWormBase-Compara
WBGene00226885Brugia malayiFrom_analysisWormBase-Compara
WBGene00227356Brugia malayiFrom_analysisWormBase-Compara
WBGene00227522Brugia malayiFrom_analysisWormBase-Compara
WBGene00229038Brugia malayiFrom_analysisWormBase-Compara
WBGene00230700Brugia malayiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity. Is an ortholog of C. elegans tdp-1. In C. elegans, tdp-1 is involved in several processes, including RNA splicing; determination of adult lifespan; and hyperosmotic response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm4094a
Bm4094b
Corresponding_transcriptBm4094a.1
Bm4094b.1
Other_sequence (11)
Experimental_infoExpression_clusterWBPaper00045439:BM_Cluster_P16
WBPaper00051007:downregulated_F120_vs_F30
WBPaper00051007:downregulated_M120_vs_M30
ReferenceWBPaper00045439
Remark[190208 pad] The CGC name Bma-tdp-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[200603 pad] The CGC name Bma-tdp-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene