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WormBase Tree Display for Gene: WBGene00226131

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Name Class

WBGene00226131SMapS_parentSequenceBm_v4_Chr1_scaffold_001
IdentityVersion6
NameCGC_nameBma-unc-47From_analysisInferred_from_orthology
Sequence_nameBm5870
Molecular_nameBm5870
Bm5870.1
BM05166
Other_nameBm-unc-47
TAG5870Curator_confirmedWBPerson4055
Bm1_20950ACurator_confirmedWBPerson4055
Bm1_18365ACurator_confirmedWBPerson4055
Bm1_20950Person_evidenceWBPerson5841
Public_nameBma-unc-47
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:25WBPerson4055EventCreated
205 Jul 2013 11:43:21WBPerson4055Name_changeCGC_nameBma-unc-47
Other_nameBm-unc-47
308 Feb 2019 15:42:28WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:23WBPerson1983Name_changeCGC_nameBma-unc-47
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:27WBPerson1983Name_changeCGC_nameBma-unc-47
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000975.85996From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
13.0542From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
1.76874From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
2.79046From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
3.43333From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
3.9465From_analysisRNASeq.brugia.WBls:0000097.control_median
4.45967From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
5.25939From_analysisRNASeq.brugia.WBls:0000097.control_mean
6.04991From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
WBls:00000781.7624From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
2.67916From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
2.9092From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
3.7538From_analysisRNASeq.brugia.WBls:0000078.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
4.31982From_analysisRNASeq.brugia.WBls:0000078.control_mean
5.93393From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
6.38376From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
6.81652From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
WBls:00000801.81628From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
2.0847From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
2.68913From_analysisRNASeq.brugia.WBls:0000080.control_median
2.75563From_analysisRNASeq.brugia.WBls:0000080.control_mean
3.29355From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
3.828From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
WBls:0000081 (24)
WBls:00000820.613897From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
1.16841From_analysisRNASeq.brugia.WBls:0000082.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
1.2662From_analysisRNASeq.brugia.WBls:0000082.control_mean
0From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
2.26181From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
2.2869From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
WBls:0000083 (74)
WBls:00000921.15092From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
1.38434From_analysisRNASeq.brugia.WBls:0000092.control_mean
RNASeq.brugia.WBls:0000092.control_median
1.61776From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:00000941.2772From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
1.29484From_analysisRNASeq.brugia.WBls:0000094.control_mean
RNASeq.brugia.WBls:0000094.control_median
1.31248From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
WBls:00001012.2869From_analysisRNASeq.brugia.total_over_all_stages.control_median
3.94733From_analysisRNASeq.brugia.total_over_all_stages.control_mean
WBls:00006625.54353From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
5.66065From_analysisRNASeq.brugia.WBls:0000662.control_mean
RNASeq.brugia.WBls:0000662.control_median
5.77776From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:00006630.775656From_analysisRNASeq.brugia.WBls:0000663.control_mean
RNASeq.brugia.WBls:0000663.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
Ortholog (31)
ParalogWBGene00223750Brugia malayiFrom_analysisWormBase-Compara
WBGene00224845Brugia malayiFrom_analysisWormBase-Compara
WBGene00226610Brugia malayiFrom_analysisWormBase-Compara
WBGene00226802Brugia malayiFrom_analysisWormBase-Compara
WBGene00226981Brugia malayiFrom_analysisWormBase-Compara
WBGene00228364Brugia malayiFrom_analysisWormBase-Compara
WBGene00229367Brugia malayiFrom_analysisWormBase-Compara
WBGene00269318Brugia malayiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Amino acid transporter, transmembrane domain and Transmembrane amino acid transporter protein. Is an ortholog of C. elegans unc-47.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm5870
Corresponding_transcriptBm5870.1
Other_sequenceAcan_isotig22437
JI227521.1
RS09615
SSC00066_1
RSC00793_1
Dviv_isotig33421
SS01731
JI178176.1
MPC00406_1
MP01408
Experimental_infoExpression_clusterWBPaper00045439:BM_Cluster_P7
WBPaper00061765:L3_vs_Adult_Downregulated
ReferenceWBPaper00045439
WBPaper00046856
Remark[190208 pad] The CGC name Bma-unc-47 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Bma-unc-47 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene