WormBase Tree Display for Gene: WBGene00226145

WBGene00226145 SMap: S_parent: Sequence: Bm_v4_Chr4_scaffold_001
  Identity: Version: 7
    Name: CGC_name: Bma-del-6 From_analysis: Inferred_from_orthology
      Sequence_name: Bm5884
      Molecular_name: Bm5884
        Bm5884.1
        BM43190
      Other_name: Bm-del-6
        TAG5884 Curator_confirmed: WBPerson4055
        Bm1_02185A Curator_confirmed: WBPerson4055
        TAG7809
        Bm1_02180A Curator_confirmed: WBPerson4055
        Bm1_02180 Person_evidence: WBPerson5841
        Bm1_02185 Person_evidence: WBPerson5841
      Public_name: Bma-del-6
    Species: Brugia malayi
    History: Version_change: 1 10 Dec 2012 14:43:25 WBPerson4055 Event: Created
        2 05 Jul 2013 11:43:21 WBPerson4055 Name_change: CGC_name: Bma-del-6
                Other_name: Bm-del-6
        3 04 Nov 2015 16:25:20 WBPerson4055 Event: Acquires_merge: WBGene00228070
        4 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        5 08 May 2019 10:09:24 WBPerson1983 Name_change: CGC_name: Bma-del-6
        6 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        7 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Bma-del-6
      Acquires_merge: WBGene00228070
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: del
    RNASeq_FPKM: WBls:0000097 0.126881 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
        0.010254 From_analysis: RNASeq.brugia.WBls:0000097.control_median
        0.020507 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
        0.243982 From_analysis: RNASeq.brugia.WBls:0000097.control_mean
        0.282976 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
        1.16041 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
        0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
            RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
            RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
      WBls:0000078 0.427896 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
        0.636533 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
        0.640459 From_analysis: RNASeq.brugia.WBls:0000078.control_mean
        0.702354 From_analysis: RNASeq.brugia.WBls:0000078.control_median
            RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
        0.761679 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
        0.824118 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
        1.13063 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
        0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
      WBls:0000080 0.011769 From_analysis: RNASeq.brugia.WBls:0000080.control_mean
        0.047074 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
        0 From_analysis: RNASeq.brugia.WBls:0000080.control_median
            RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
            RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
            RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
      WBls:0000081 (22)
      WBls:0000082 0.226863 From_analysis: RNASeq.brugia.WBls:0000082.control_median
            RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
        0.233442 From_analysis: RNASeq.brugia.WBls:0000082.control_mean
        0.4464 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
        0.493946 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
        0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
            RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
      WBls:0000083 (82)
      WBls:0000092 0.387263 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
        0.392735 From_analysis: RNASeq.brugia.WBls:0000092.control_mean
            RNASeq.brugia.WBls:0000092.control_median
        0.398207 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
      WBls:0000094 0.927401 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
        0.973261 From_analysis: RNASeq.brugia.WBls:0000094.control_mean
            RNASeq.brugia.WBls:0000094.control_median
        1.01912 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
      WBls:0000101 0.398207 From_analysis: RNASeq.brugia.total_over_all_stages.control_median
        3.22814 From_analysis: RNASeq.brugia.total_over_all_stages.control_mean
      WBls:0000662 0.308989 From_analysis: RNASeq.brugia.WBls:0000662.control_mean
            RNASeq.brugia.WBls:0000662.control_median
        0.617978 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
        0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
      WBls:0000663 0.345093 From_analysis: RNASeq.brugia.WBls:0000663.control_mean
            RNASeq.brugia.WBls:0000663.control_median
            RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
    GO_annotation: 00244298
      00244299
      00244300
    Ortholog (29)
    Paralog: WBGene00222413 Brugia malayi From_analysis: WormBase-Compara
      WBGene00222950 Brugia malayi From_analysis: WormBase-Compara
      WBGene00224704 Brugia malayi From_analysis: WormBase-Compara
      WBGene00225635 Brugia malayi From_analysis: WormBase-Compara
      WBGene00226332 Brugia malayi From_analysis: WormBase-Compara
      WBGene00226336 Brugia malayi From_analysis: WormBase-Compara
      WBGene00228249 Brugia malayi From_analysis: WormBase-Compara
      WBGene00234520 Brugia malayi From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable sodium channel activity. Predicted to be involved in sodium ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans del-6. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Bm5884
    Corresponding_transcript: Bm5884.1
    Other_sequence (41)
  Experimental_info: Expression_cluster: WBPaper00049974:ivermectin_100nM_48h_upregulated
      WBPaper00051007:downregulated_F120_vs_F30
      WBPaper00051007:downregulated_F120_vs_F42
      WBPaper00051007:downregulated_M120_vs_F120
      WBPaper00051007:upregulated_M42_vs_F42
      WBPaper00051007:upregulated_M42_vs_M30
      WBPaper00051007:upregulated_M120_vs_M42
      WBPaper00061765:Adult_vs_Micro_Downregulated
      WBPaper00061765:L3_vs_Adult_Upregulated
      WBPaper00061765:L4_vs_Adult_Upregulated
  Reference: WBPaper00045439
  Remark: [190208 pad] The CGC name Bma-del-6 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Bma-del-6 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene