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WormBase Tree Display for Gene: WBGene00226150

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Name Class

WBGene00226150SMapS_parentSequenceBm_v4_Chr1_scaffold_001
IdentityVersion6
NameCGC_nameBma-unc-49From_analysisInferred_from_orthology
Sequence_nameBm5889
Molecular_nameBm5889
Bm5889.1
BM46863
Other_nameBm-unc-49
TAG5889Curator_confirmedWBPerson4055
Bm1_13175ACurator_confirmedWBPerson4055
Bm1_13175Person_evidenceWBPerson5841
Public_nameBma-unc-49
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:25WBPerson4055EventCreated
205 Jul 2013 11:43:21WBPerson4055Name_changeCGC_nameBma-unc-49
Other_nameBm-unc-49
324 Mar 2014 11:31:06WBPerson4055Name_changeCGC_nameRemoved
Other_nameBma-unc-49
408 May 2019 10:09:25WBPerson1983Name_changeCGC_nameBma-unc-49
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:28WBPerson1983Name_changeCGC_nameBma-unc-49
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000973.48941From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
1.05259From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
0From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
2.68427From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
2.94173From_analysisRNASeq.brugia.WBls:0000097.control_mean
3.03802From_analysisRNASeq.brugia.WBls:0000097.control_median
3.39178From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
4.23539From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
6.28636From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
WBls:00000781.52247From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
2.55764From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
3.43054From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
3.62804From_analysisRNASeq.brugia.WBls:0000078.control_mean
3.7229From_analysisRNASeq.brugia.WBls:0000078.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
3.86588From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
4.0528From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
6.24406From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
WBls:00000802.8924From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
3.79824From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
4.65214From_analysisRNASeq.brugia.WBls:0000080.control_mean
4.85933From_analysisRNASeq.brugia.WBls:0000080.control_median
5.92043From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
5.99751From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
WBls:0000081 (23)
WBls:00000820.564771From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
0.656924From_analysisRNASeq.brugia.WBls:0000082.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
0.706045From_analysisRNASeq.brugia.WBls:0000082.control_mean
1.09801From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
1.21052From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
0From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
WBls:0000083 (75)
WBls:00000922.48965From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
2.64486From_analysisRNASeq.brugia.WBls:0000092.control_mean
RNASeq.brugia.WBls:0000092.control_median
2.80007From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:00000942.11404From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
2.34746From_analysisRNASeq.brugia.WBls:0000094.control_mean
RNASeq.brugia.WBls:0000094.control_median
2.58088From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:00001012.02911From_analysisRNASeq.brugia.total_over_all_stages.control_median
2.48856From_analysisRNASeq.brugia.total_over_all_stages.control_mean
WBls:00006622.79334From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
3.63004From_analysisRNASeq.brugia.WBls:0000662.control_mean
RNASeq.brugia.WBls:0000662.control_median
4.46675From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
WBls:00006632.4994From_analysisRNASeq.brugia.WBls:0000663.control_mean
RNASeq.brugia.WBls:0000663.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
GO_annotation00244301
00244302
00244303
00244304
00244305
00244306
00244307
Ortholog (29)
Paralog (47)
Structured_descriptionAutomated_descriptionPredicted to enable GABA-A receptor activity and extracellular ligand-gated monoatomic ion channel activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of O. volvulus OVOC7902.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm5889
Corresponding_CDS_historyBm5889:bm266
Corresponding_transcriptBm5889.1
Other_sequence (31)
Experimental_infoExpression_clusterWBPaper00051007:downregulated_M120_vs_M30
WBPaper00051007:downregulated_M120_vs_M42
WBPaper00051007:upregulated_M120_vs_F120
WBPaper00061765:L3_vs_Adult_Downregulated
ReferenceWBPaper00045439
Remark[210528 pad] The CGC name Bma-unc-49 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene